Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909897.1_cds_XP_016459991.1_53458
CDS Infomation

[gene=LOC107783525] [db_xref=GeneID:107783525] [protein=two-component response regulator-like PRR37 isoform X2] [protein_id=XP_016459991.1] [location=join(13228..13585,20551..20712,20822..20955,21186..21347,25475..25658,25793..26231,26308..27106,27468..27572)] [gbkey=CDS]
Sequence

ATGAGAGGAATTCGGATGGACTCAAATGGTCCCCCAACTAAAGGGTTGGTGGAACTCAAT
TGTCATAGCATACAGGATGGCCAGAATGGAGTGAGGGATGGAATTACTGGTGAAGGACAG
GGGCTTTCAGAGGAAGATGAGTCAAGGATTAATGAGGATGTCGAAGGTGGGAATGAAACA
CAGAGGGATTTGGTACATGTACAGTCTGTTCTACAAACACAGCAGCAACAGCCTCAAGGG
CCTTTGGTTAGGTGGGACCGTTTTCTTCCAATTAGATCCCTCAAGGTTTTGCTGGTGGAA
AATGATGATTCAACTCGTCATGTTGTTAGTGCATTGCTTCGAAACTGCAGCTATGAAGTT
ACAGCTGTTGGAAACGCCCTTGAAGCATGGAGGATTCTAGGAGATCTTGCTAACCATGTT
GATCTAGTTCTGACGGAAGTAGCCATGCCGTATTTGTCAGGCATTGGTCTTTTGTCAAAG
ATTATGAATCACAAAACTCGCAAGAATGTTCCGGTGATTATGATGTCTGCTAATGACTCT
ATGGGTATCGTCTTTAAGTGTTTGTCAAAGGGTGCGGTTGACTTTTTAGTGAAGCCTATT
CGAAAGAATGAGCTAAAAAATCTCTGGCAGCATGTTTGGAGGAAATGCCATAGTTCAAGT
GGAAGCGGAAGTGAAAGTGGCATACAGACTCAGAAGTCTACGAAATCTAAAAGTATTGAA
GGATCGTTGAATAACACTGACAGCAATGATGAAGCTGAGAATGGGAGCTTTGATCTGGAT
GACCGGGACGGAAGCGACAATGGAAGTGGCACCCAGAGTTCGTGGTCCAAAAGGGCCATA
GAAGTTGACAGCCCCCAACCCATGTCACCATGGAATGAATTGGCCGATCCCCCTGATAGT
ACTTGTGCCCAGGTTGTCCATTCAAGGCCAGAAGCACTTAGTGCTACCTGGGTGCCTGCA
ACTGCCCCCAGAGAGTGCCGCAATGAGAAGGATGAACTTGGAAATGCTAGAATGGGTAAA
GATTTGAACATAGGTGTCACTAGTGTTCCAGAGCTTGAAGGCCGATCAGGTAAAGCTATG
GATGATTTAGCAGCTCCTATGAAGGACAAACGTTTGGAATTAGACCCCAAGGATAGTGAG
AAAATGGTCAGAAACCTCAAGCACAACAAGGAAACATGGGAAGATGACCTGAAAGACATG
GATGTTGGTTATAGGGGTGATCACACCAAAACCGGTACTCCTCTGGTAGAAAGTATGGCC
AATGAAGTTCCGAAAGATCCTTCCAAGATCACAAACATCAAAGAAATAGCCACCTATGAC
AGTAAAGGCATGCCTTCTCTTGAACTTAGTTTGAAGCAGCTTCGAGATGTTGGAGAAATT
GGGACCAGTGTGCAAGAGCGCAATATACTCAGGCATTCAGACCTTTCAGCATTCTCTAGG
TATAATGCTCCTGCTTCAAATGCTAATCAGGCTCCAACTGGGAATGTGGGCAGCTGTTCA
CCAGTTAATAATAGCTCAGAAGTTGCAAAAACAGAATCACTGAATAACTTGCGTTCAAAG
TCAAGCAGTACCCCTAACCAGCGCTCAAATGGAAGTAGTAACAACAATGACATGGGCTCC
TCGACAAATAATTTCTTTGTCAAACAAGAAACATTAACTGACAAGCCAATAACCAAACCT
GCAGTCAATGCCCATACCTGTTCCGCATTTCAACCAGTGCAACATGGTCATAATTCTTCT
CTTCAACCTATGGTTCCAGGAAAACAAGATGCTGCAAAGGCAGCCCTGGCCCAAGCAAGG
GCGATGCAGCAGCAGGTCCAAGTTCAGCACCACCATCATCACTACCATCACCATCACCAC
CATGTACTTGACCTGAAGCAGCAACAACAGCTGCTTGACACTGATGATTCGACCATGAGA
AATGCTGTTGGAGCTGCTCCAAATTTCGGAACATCTGACATGGTAGGAACTCCTGTTGAA
GGAGACGCTGCTAATTATGGAAGTGCATCAGGAAGTAACAATGGAAGCAATGGGCAAAAT
GGAAGCAGTGGCCAAAATGGTAGCAGCACTGCTCTAATTGCTGAAGGAACAAATTTGGTT
GCTGAAAATGAAGCGGGTGAAAAATGTGAAATTGGCAGCGTGAGTGGAAGTGCAAGCAGA
AGTGATCACTCGGCTCAAAGAGTGGCTGCTTTGATTAAATTCCGGCAAAAGAGGAAGGAG
AGGTGCTTTGAGAAAAAGGTCCGGTACCAAAGTAGAAAGAGACTCGCAGAACAGAGGCCG
CGTGTGCGAGGGCAATTTGTGCGTCAGGATGCAGACAAAAATAAAAGCAATGATGATTCC
TGA

Peptide Sequence

PEP ID

XP_016459991.1
PEP Infomation

PREDICTED: two-component response regulator-like PRR37 isoform X2 [Nicotiana tabacum]
Sequence

MRGIRMDSNGPPTKGLVELNCHSIQDGQNGVRDGITGEGQGLSEEDESRINEDVEGGNET
QRDLVHVQSVLQTQQQQPQGPLVRWDRFLPIRSLKVLLVENDDSTRHVVSALLRNCSYEV
TAVGNALEAWRILGDLANHVDLVLTEVAMPYLSGIGLLSKIMNHKTRKNVPVIMMSANDS
MGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRKCHSSSGSGSESGIQTQKSTKSKSIE
GSLNNTDSNDEAENGSFDLDDRDGSDNGSGTQSSWSKRAIEVDSPQPMSPWNELADPPDS
TCAQVVHSRPEALSATWVPATAPRECRNEKDELGNARMGKDLNIGVTSVPELEGRSGKAM
DDLAAPMKDKRLELDPKDSEKMVRNLKHNKETWEDDLKDMDVGYRGDHTKTGTPLVESMA
NEVPKDPSKITNIKEIATYDSKGMPSLELSLKQLRDVGEIGTSVQERNILRHSDLSAFSR
YNAPASNANQAPTGNVGSCSPVNNSSEVAKTESLNNLRSKSSSTPNQRSNGSSNNNDMGS
STNNFFVKQETLTDKPITKPAVNAHTCSAFQPVQHGHNSSLQPMVPGKQDAAKAALAQAR
AMQQQVQVQHHHHHYHHHHHHVLDLKQQQQLLDTDDSTMRNAVGAAPNFGTSDMVGTPVE
GDAANYGSASGSNNGSNGQNGSSGQNGSSTALIAEGTNLVAENEAGEKCEIGSVSGSASR
SDHSAQRVAALIKFRQKRKERCFEKKVRYQSRKRLAEQRPRVRGQFVRQDADKNKSNDDS

Transcript Sequence

Gene sequence data has not been registered.